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Found 2604 results for class "Germline". Showing entries 1-20.
| Graph | Cluster | Transcripts | Mean logCPM | Classification | Smed/Human type | Human gene | Annotation |
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MligTCv3c-4072.3 | Mlig023254.g3, Mlig023254.g1 | 10.87 | Int S/G2/M Germline S/G2/M, no gonads |
X1 | HSP90AA1 | Mlig023254.g3 {Length: 2829} {Pfam: Hsp90 protein [PF00183.16, score=798.1]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF02518.24, score=47.6]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF13589.4, score=29.3]} {Human: ENSG00000080824, HSP90AA1, heat shock protein 90kDa alpha (cytosolic), class A member 1, [RH, Score=704, Expect=0.0]; ENSG00000096384, HSP90AB1, heat shock protein 90kDa alpha (cytosolic), class B member 1, [RH, Score=674, Expect=0.0]} {Dmel: FBgn0001233, Hsp83, Heat shock protein 83, [RH, Score=691, Expect=0.0]} {Celegans: WBGene00000915, daf-21, Caenorhabditis elegans Protein DAF-21 (daf-21) mRNA, complete cds., [RH, Score=689, Expect=0.0]} {Smed: dd_Smed_v6_56_0_2, [RH, Score=734, Expect=0.0]} {Smes: dd_Smes_v1_35808_1_1, [RH, Score=734, Expect=0.0]; dd_Smes_v1_35808_2_1, [RH, Score=724, Expect=0.0]} {Smans: Smp_072330.2, [RH, Score=612, Expect=0.0]; Smp_072330.1, [RH, Score=582, Expect=0.0]} {UniRef: UniRef50_P07900, Heat shock protein HSP 90-alpha n=175 Tax=Eukaryota TaxID=2759 RepID=HS90A_HUMAN, [Score=704, Expect=0.0]; UniRef50_P82995, Heat shock protein HSP 90-alpha n=292 Tax=Eukaryota TaxID=2759 RepID=HS90A_RAT, [Score=703, Expect=0.0]} {RNA1509_125} Mlig023254.g1 {Length: 2877} {Pfam: Hsp90 protein [PF00183.16, score=798.1]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF02518.24, score=56.3]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF13589.4, score=40.4]} {Human: ENSG00000080824, HSP90AA1, heat shock protein 90kDa alpha (cytosolic), class A member 1, [RH, Score=703, Expect=0.0]; ENSG00000096384, HSP90AB1, heat shock protein 90kDa alpha (cytosolic), class B member 1, [RH, Score=674, Expect=0.0]} {Dmel: FBgn0001233, Hsp83, Heat shock protein 83, [RH, Score=691, Expect=0.0]} {Celegans: WBGene00000915, daf-21, Caenorhabditis elegans Protein DAF-21 (daf-21) mRNA, complete cds., [RH, Score=690, Expect=0.0]} {Smed: dd_Smed_v6_56_0_2, [RH, Score=734, Expect=0.0]} {Smes: dd_Smes_v1_35808_1_1, [RH, Score=734, Expect=0.0]; dd_Smes_v1_35808_2_1, [RH, Score=725, Expect=0.0]} {Smans: Smp_072330.2, [RH, Score=612, Expect=0.0]; Smp_072330.1, [RH, Score=583, Expect=0.0]} {UniRef: UniRef50_P07900, Heat shock protein HSP 90-alpha n=175 Tax=Eukaryota TaxID=2759 RepID=HS90A_HUMAN, [Score=703, Expect=0.0]; UniRef50_P82995, Heat shock protein HSP 90-alpha n=292 Tax=Eukaryota TaxID=2759 RepID=HS90A_RAT, [Score=703, Expect=0.0]} {RNA1509_125} |
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MligTCv3c-8933.0 | Mlig030334.g8, Mlig030334.g3, Mlig030334.g5 | 9.2 | Irradiation Int S/G2/M Germline |
Mlig030334.g8 {Length: 1665} {SignalP} {RNA1509_14264} Mlig030334.g3 {Length: 1665} {SignalP} {RNA1509_14264} Mlig030334.g5 {Length: 1662} {SignalP} {RNA1509_14264} |
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MligTCv3c-19006.2 | Mlig011389.g1 | 8.78 | Int S/G2/M Germline |
X2 | P4HB | Mlig011389.g1 {Length: 3108} {SignalP} {Pfam: Thioredoxin [PF00085.18, score=219.5]; Thioredoxin-like domain [PF13848.4, score=157.7]; Thioredoxin-like domain [PF13098.4, score=58.4]; Calsequestrin [PF01216.15, score=53.7]; Thioredoxin-like [PF13905.4, score=48.3]; OST3 / OST6 family, transporter family [PF04756.11, score=46.6]; Thioredoxin-like [PF13899.4, score=44.4]; ERp29, N-terminal domain [PF07912.11, score=42.6]; AhpC/TSA family [PF00578.19, score=37.6]; Redoxin [PF08534.8, score=31.1]; F plasmid transfer operon protein [PF13728.4, score=20.2]} {Human: ENSG00000185624, P4HB, prolyl 4-hydroxylase, beta polypeptide, [RH, Score=572, Expect=0.0]} {Dmel: FBgn0014002, Pdi, Protein disulfide isomerase, [RH, Score=511, Expect=1e-179]} {Celegans: WBGene00003963, pdi-2, Caenorhabditis elegans Protein PDI-2, isoform a (pdi-2) mRNA, complete cds., [RH, Score=566, Expect=0.0]} {Smed: dd_Smed_v6_250_0_1, [RH, Score=579, Expect=0.0]} {Smes: dd_Smes_v1_77735_1_1, [RH, Score=579, Expect=0.0]} {Smans: Smp_056760.1, [RH, Score=503, Expect=1e-176]} {UniRef: UniRef50_A0A1I8FUH2, Protein disulfide-isomerase n=2 Tax=Macrostomum lignano TaxID=282301 RepID=A0A1I8FUH2_9PLAT, [Score=647, Expect=0.0]} {RNA1509_2339, RNA1509_70} |
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MligTCv3c-17688.1 | Mlig001691.g1 | 8.72 | Irradiation Int S/G2/M Germline |
Mlig001691.g1 {Length: 1249} {Pfam: Protein of unknown function (DUF3540) [PF12059.6, score=19.1]} {RNA1509_1402, RNA1509_1798, RNA1509_18815, RNA1509_19310, RNA1509_19876, RNA1509_2116, RNA1509_2178, RNA1509_33453, RNA1509_4048, RNA1509_47, RNA1509_51669, RNA1509_517, RNA1509_52628, RNA1509_7956} | ||
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MligTCv3c-17053.5 | Mlig004264.g2, Mlig004264.g1 | 8.38 | Int S/G2/M Germline |
Sexual_biased; Xins | CALR | Mlig004264.g2 {Length: 2459} {SignalP} {Pfam: Calreticulin family [PF00262.16, score=289.8]} {Human: ENSG00000179218, CALR, calreticulin, [RH, Score=386, Expect=1e-132]} {Dmel: FBgn0005585, Crc, Calreticulin, [RH, Score=362, Expect=1e-123]} {Celegans: WBGene00000802, crt-1, Caenorhabditis elegans Protein CRT-1 (crt-1) mRNA, complete cds., [RH, Score=363, Expect=1e-123]} {Smed: dd_Smed_v6_220_0_4, [RH, Score=431, Expect=1e-150]} {Smes: dd_Smes_v1_27864_1_2, [RH, Score=431, Expect=1e-150]} {Smans: Smp_030370.1, [RH, Score=314, Expect=1e-105]} {UniRef: UniRef50_A5LGG9, Calreticulin n=6 Tax=Bilateria TaxID=33213 RepID=A5LGG9_CRAGI, [Score=408, Expect=1e-138]} {RNA1509_2053, RNA1509_2499, RNA1509_8886} Mlig004264.g1 {Length: 2459} {SignalP} {Pfam: Calreticulin family [PF00262.16, score=289.8]} {Human: ENSG00000179218, CALR, calreticulin, [RH, Score=386, Expect=1e-132]} {Dmel: FBgn0005585, Crc, Calreticulin, [RH, Score=362, Expect=1e-123]} {Celegans: WBGene00000802, crt-1, Caenorhabditis elegans Protein CRT-1 (crt-1) mRNA, complete cds., [RH, Score=363, Expect=1e-123]} {Smed: dd_Smed_v6_220_0_4, [RH, Score=431, Expect=1e-150]} {Smes: dd_Smes_v1_27864_1_2, [RH, Score=431, Expect=1e-150]} {Smans: Smp_030370.1, [RH, Score=314, Expect=1e-105]} {UniRef: UniRef50_A5LGG9, Calreticulin n=6 Tax=Bilateria TaxID=33213 RepID=A5LGG9_CRAGI, [Score=408, Expect=1e-138]} {RNA1509_8886} |
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MligTCv3c-5880.1 | Mlig032789.g1 | 8.18 | Irradiation Int S/G2/M Germline S/G2/M, no gonads |
X1; X2 | DDX6 | Mlig032789.g1 {Length: 3245} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.27, score=147.5]; Helicase conserved C-terminal domain [PF00271.29, score=98.5]} {Human: ENSG00000110367, DDX6, DEAD (Asp-Glu-Ala-Asp) box polypeptide 6, [RH, Score=639, Expect=0.0]} {Dmel: FBgn0004419, me31B, maternal expression at 31B, [RH, Score=639, Expect=0.0]} {Celegans: WBGene00000479, cgh-1, Caenorhabditis elegans Protein CGH-1 (cgh-1) mRNA, complete cds., [RH, Score=625, Expect=0.0]} {Smed: dd_Smed_v6_1034_0_1, [RH, Score=682, Expect=0.0]; dd_Smed_v6_11802_0_1, [RH, Score=664, Expect=0.0]} {Smes: dd_Smes_v1_18084_1_1, [RH, Score=682, Expect=0.0]; dd_Smes_v1_15090_1_1, [RH, Score=664, Expect=0.0]} {Smans: Smp_211330.1, [RH, Score=635, Expect=0.0]} {UniRef: UniRef50_V5I8P5, Putative ATP-dependent RNA helicase me31b n=30 Tax=Bilateria TaxID=33213 RepID=V5I8P5_ANOGL, [Score=651, Expect=0.0]} {RNA1509_2093, RNA1509_3653, RNA1509_4861} |
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MligTCv3c-19006.0 | Mlig011389.g2 | 8.08 | Int S/G2/M Germline |
X2 | P4HB | Mlig011389.g2 {Length: 3095} {SignalP} {Pfam: Thioredoxin [PF00085.18, score=219.5]; Thioredoxin-like domain [PF13848.4, score=157.7]; Thioredoxin-like domain [PF13098.4, score=58.4]; Calsequestrin [PF01216.15, score=53.7]; Thioredoxin-like [PF13905.4, score=48.3]; OST3 / OST6 family, transporter family [PF04756.11, score=46.6]; Thioredoxin-like [PF13899.4, score=44.4]; ERp29, N-terminal domain [PF07912.11, score=42.6]; AhpC/TSA family [PF00578.19, score=37.6]; Redoxin [PF08534.8, score=31.1]; F plasmid transfer operon protein [PF13728.4, score=20.2]} {Human: ENSG00000185624, P4HB, prolyl 4-hydroxylase, beta polypeptide, [RH, Score=572, Expect=0.0]} {Dmel: FBgn0014002, Pdi, Protein disulfide isomerase, [RH, Score=511, Expect=1e-179]} {Celegans: WBGene00003963, pdi-2, Caenorhabditis elegans Protein PDI-2, isoform a (pdi-2) mRNA, complete cds., [RH, Score=566, Expect=0.0]} {Smed: dd_Smed_v6_250_0_1, [RH, Score=579, Expect=0.0]} {Smes: dd_Smes_v1_77735_1_1, [RH, Score=579, Expect=0.0]} {Smans: Smp_056760.1, [RH, Score=503, Expect=1e-176]} {UniRef: UniRef50_A0A1I8FUH2, Protein disulfide-isomerase n=2 Tax=Macrostomum lignano TaxID=282301 RepID=A0A1I8FUH2_9PLAT, [Score=647, Expect=0.0]} {RNA1509_11706, RNA1509_1575} |
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MligTCv3c-14716.1 | Mlig003532.g1 | 8.07 | Irradiation Int S/G2/M Germline |
Mlig003532.g1 {Length: 3472} {RNA1509_32167} | ||
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MligTCv3c-3258.3 | Mlig009946.g2 | 8.01 | Int S/G2/M Germline S/G2/M, no gonads |
Neoblast; Sexual_biased; X1 | PABPC1 | Mlig009946.g2 {Length: 3590} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.20, score=212.8]; Poly-adenylate binding protein, unique domain [PF00658.16, score=107.3]; Nup53/35/40-type RNA recognition motif [PF14605.4, score=34.5]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.4, score=32.4]; RNA binding motif [PF08777.9, score=24.8]; Occluded RNA-recognition motif [PF16842.3, score=19.5]; RNA recognition motif [PF16367.3, score=18.7]} {Human: ENSG00000070756, PABPC1, poly(A) binding protein, cytoplasmic 1, [Score=536, Expect=0.0]; ENSG00000151846, PABPC3, poly(A) binding protein, cytoplasmic 3, [Score=516, Expect=1e-177]} {Dmel: FBgn0265297, pAbp, , [Score=456, Expect=1e-153]} {Celegans: WBGene00003902, pab-1, Caenorhabditis elegans Protein PAB-1, isoform a (pab-1) mRNA, complete cds., [RH, Score=459, Expect=1e-156]} {Smed: dd_Smed_v6_11729_0_1, [Score=556, Expect=0.0]} {Smes: dd_Smes_v1_98681_1_1, [Score=556, Expect=0.0]} {Smans: Smp_024140.1, [Score=418, Expect=1e-138]; Smp_024140.4, [Score=417, Expect=1e-138]; Smp_024140.3, [Score=417, Expect=1e-138]} {UniRef: UniRef50_A0A1J1HNU4, CLUMA_CG002962, isoform A n=1 Tax=Clunio marinus TaxID=568069 RepID=A0A1J1HNU4_9DIPT, [Score=578, Expect=0.0]} {RNA1509_10073, RNA1509_114, RNA1509_24526, RNA1509_8584} {WURTZEL: Neoblast [dd_Smed_v6_11729_0_1, cytoplasmic poly(A) binding protein (PABPC)]} |
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MligTCv3c-17688.2 | Mlig022465.g2 | 7.97 | Irradiation Int S/G2/M Germline |
Mlig022465.g2 {Length: 1207} {SignalP} | ||
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MligTCv3c-18344.0 | Mlig006934.g1 | 7.87 | Irradiation Int S/G2/M Germline |
Xins | Mlig006934.g1 {Length: 3674} {Pfam: SPATIAL [PF15256.4, score=102.3]} {Smed: dd_Smed_v6_8051_0_1, [Score=62.4, Expect=3e-11]} {Smes: dd_Smes_v1_35041_1_1, [RH, Score=64.7, Expect=1e-12]} {Smans: Smp_194750.1, [Score=71.6, Expect=1e-14]} {UniRef: UniRef50_K1R2A0, Protein SPATIAL n=7 Tax=Mollusca TaxID=6447 RepID=K1R2A0_CRAGI, [Score=94.7, Expect=8e-20]; UniRef50_UPI000698FA0C, PREDICTED: uncharacterized protein LOC106160400 n=1 Tax=Lingula unguis TaxID=7574 RepID=UPI000698FA0C, [Score=94.4, Expect=1e-19]} {RNA1509_12769, RNA1509_15678, RNA1509_2033, RNA1509_25356, RNA1509_398, RNA1509_40013, RNA1509_4275, RNA1509_43669, RNA1509_45918, RNA1509_48879, RNA1509_51475, RNA1509_9566} | |
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MligTCv3c-14716.2 | Mlig019340.g1 | 7.74 | Irradiation Int S/G2/M Germline |
Mlig019340.g1 {Length: 792} {SignalP} {RNA1509_16634, RNA1509_24230, RNA1509_36542, RNA1509_3936, RNA1509_59} | ||
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MligTCv3c-5880.0 | Mlig032789.g3, Mlig032789.g2 | 7.55 | Irradiation Int S/G2/M Germline |
X1; X2 | DDX6 | Mlig032789.g3 {Length: 3255} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.27, score=147.5]; Helicase conserved C-terminal domain [PF00271.29, score=98.5]} {Human: ENSG00000110367, DDX6, DEAD (Asp-Glu-Ala-Asp) box polypeptide 6, [RH, Score=639, Expect=0.0]} {Dmel: FBgn0004419, me31B, maternal expression at 31B, [RH, Score=639, Expect=0.0]} {Celegans: WBGene00000479, cgh-1, Caenorhabditis elegans Protein CGH-1 (cgh-1) mRNA, complete cds., [RH, Score=625, Expect=0.0]} {Smed: dd_Smed_v6_1034_0_1, [RH, Score=682, Expect=0.0]; dd_Smed_v6_11802_0_1, [RH, Score=664, Expect=0.0]} {Smes: dd_Smes_v1_18084_1_1, [RH, Score=682, Expect=0.0]; dd_Smes_v1_15090_1_1, [RH, Score=664, Expect=0.0]} {Smans: Smp_211330.1, [RH, Score=635, Expect=0.0]} {UniRef: UniRef50_V5I8P5, Putative ATP-dependent RNA helicase me31b n=30 Tax=Bilateria TaxID=33213 RepID=V5I8P5_ANOGL, [Score=651, Expect=0.0]} {RNA1509_1529, RNA1509_1932, RNA1509_2093, RNA1509_54247, RNA1509_54688, RNA1509_7596, RNA1509_85} Mlig032789.g2 {Length: 3248} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.27, score=147.5]; Helicase conserved C-terminal domain [PF00271.29, score=98.5]} {Human: ENSG00000110367, DDX6, DEAD (Asp-Glu-Ala-Asp) box polypeptide 6, [RH, Score=639, Expect=0.0]} {Dmel: FBgn0004419, me31B, maternal expression at 31B, [RH, Score=639, Expect=0.0]} {Celegans: WBGene00000479, cgh-1, Caenorhabditis elegans Protein CGH-1 (cgh-1) mRNA, complete cds., [RH, Score=625, Expect=0.0]} {Smed: dd_Smed_v6_1034_0_1, [RH, Score=682, Expect=0.0]; dd_Smed_v6_11802_0_1, [RH, Score=664, Expect=0.0]} {Smes: dd_Smes_v1_18084_1_1, [RH, Score=682, Expect=0.0]; dd_Smes_v1_15090_1_1, [RH, Score=664, Expect=0.0]} {Smans: Smp_211330.1, [RH, Score=635, Expect=0.0]} {UniRef: UniRef50_V5I8P5, Putative ATP-dependent RNA helicase me31b n=30 Tax=Bilateria TaxID=33213 RepID=V5I8P5_ANOGL, [Score=651, Expect=0.0]} {RNA1509_16545, RNA1509_6078, RNA1509_85} |
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MligTCv3c-19006.1 | Mlig011389.g3 | 7.39 | Int S/G2/M Germline |
Mlig011389.g3 {Length: 1117} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_29298, RNA1509_70} | ||
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MligTCv3c-18081.5 | Mlig012955.g2 | 7.39 | Irradiation Int S/G2/M Germline |
Mlig012955.g2 {Length: 927} {RNA1509_10915, RNA1509_12113, RNA1509_163, RNA1509_224, RNA1509_5645} | ||
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MligTCv3c-562.2625 | Mlig011676.g1, Mlig011676.g2 | 7.35 | Irradiation Int S/G2/M Germline |
X1 | TUBB | Mlig011676.g1 {Length: 1965} {Pfam: Tubulin/FtsZ family, GTPase domain [PF00091.23, score=227.9]; Tubulin C-terminal domain [PF03953.15, score=146.0]; Misato Segment II tubulin-like domain [PF10644.7, score=24.5]} {Human: ENSG00000235067, TUBB, tubulin, beta, [Score=763, Expect=0.0]; ENSG00000227739, TUBB, tubulin, beta, [Score=763, Expect=0.0]; ENSG00000232575, TUBB, tubulin, beta, [Score=763, Expect=0.0]; ENSG00000229684, TUBB, tubulin, beta, [Score=763, Expect=0.0]; ENSG00000183311, TUBB, tubulin, beta, [Score=763, Expect=0.0]; ENSG00000224156, TUBB, tubulin, beta, [Score=763, Expect=0.0]; ENSG00000232421, TUBB, tubulin, beta, [Score=763, Expect=0.0]; ENSG00000196230, TUBB, tubulin, beta, [Score=761, Expect=0.0]; ENSG00000188229, TUBB2C, tubulin, beta 2C, [Score=758, Expect=0.0]; ENSG00000137285, TUBB2B, tubulin, beta 2B, [Score=758, Expect=0.0]; ENSG00000137267, TUBB2A, tubulin, beta 2A, [Score=753, Expect=0.0]; ENSG00000104833, TUBB4, tubulin, beta 4, [Score=750, Expect=0.0]; ENSG00000198211, TUBB3, tubulin, beta 3, [Score=747, Expect=0.0]; ENSG00000176014, TUBB6, tubulin, beta 6, [Score=725, Expect=0.0]} {Dmel: FBgn0003887, betaTub56D, beta-Tubulin at 56D, [Score=754, Expect=0.0]; FBgn0003889, betaTub85D, beta-Tubulin at 85D, [Score=751, Expect=0.0]; FBgn0003888, betaTub60D, beta-Tubulin at 60D, [Score=739, Expect=0.0]; FBgn0003890, betaTub97EF, beta-Tubulin at 97EF, [Score=732, Expect=0.0]} {Celegans: WBGene00000248, ben-1, Caenorhabditis elegans Protein BEN-1 (ben-1) mRNA, complete cds., [Score=753, Expect=0.0]} {Smed: dd_Smed_v6_83_0_3, [Score=766, Expect=0.0]} {Smes: dd_Smes_v1_88073_1_1, [Score=641, Expect=0.0]} {Smans: Smp_192110.1, [Score=766, Expect=0.0]; Smp_078040.1, [Score=764, Expect=0.0]; Smp_079960.1, [Score=755, Expect=0.0]; Smp_079970.1, [Score=737, Expect=0.0]} {UniRef: UniRef50_P07437, Tubulin beta chain n=1408 Tax=Eukaryota TaxID=2759 RepID=TBB5_HUMAN, [Score=761, Expect=0.0]; UniRef50_P68371, Tubulin beta-4B chain n=259 Tax=Eukaryota TaxID=2759 RepID=TBB4B_HUMAN, [Score=758, Expect=0.0]; UniRef50_E2A684, Tubulin beta chain n=79 Tax=Eumetazoa TaxID=6072 RepID=E2A684_CAMFO, [Score=754, Expect=0.0]; UniRef50_A0A147A9R5, Tubulin beta chain n=27 Tax=Bilateria TaxID=33213 RepID=A0A147A9R5_FUNHE, [Score=754, Expect=0.0]} {RNA1509_44} Mlig011676.g2 {Length: 1972} {Pfam: Tubulin C-terminal domain [PF03953.15, score=147.0]; Tubulin/FtsZ family, GTPase domain [PF00091.23, score=74.3]} {Human: ENSG00000232575, TUBB, tubulin, beta, [Score=511, Expect=0.0]; ENSG00000227739, TUBB, tubulin, beta, [Score=511, Expect=0.0]; ENSG00000235067, TUBB, tubulin, beta, [Score=511, Expect=0.0]; ENSG00000183311, TUBB, tubulin, beta, [Score=511, Expect=0.0]; ENSG00000224156, TUBB, tubulin, beta, [Score=511, Expect=0.0]; ENSG00000232421, TUBB, tubulin, beta, [Score=511, Expect=0.0]; ENSG00000229684, TUBB, tubulin, beta, [Score=511, Expect=0.0]; ENSG00000137285, TUBB2B, tubulin, beta 2B, [Score=509, Expect=0.0]; ENSG00000196230, TUBB, tubulin, beta, [Score=509, Expect=0.0]; ENSG00000137267, TUBB2A, tubulin, beta 2A, [Score=506, Expect=0.0]; ENSG00000188229, TUBB2C, tubulin, beta 2C, [Score=505, Expect=1e-180]; ENSG00000198211, TUBB3, tubulin, beta 3, [Score=502, Expect=1e-180]; ENSG00000104833, TUBB4, tubulin, beta 4, [Score=499, Expect=1e-177]; ENSG00000176014, TUBB6, tubulin, beta 6, [Score=493, Expect=1e-175]; ENSG00000173876, RP11-631M21.2, Tubulin beta-8 chain, [Score=489, Expect=1e-174]} {Dmel: FBgn0003887, betaTub56D, beta-Tubulin at 56D, [Score=508, Expect=0.0]; FBgn0003889, betaTub85D, beta-Tubulin at 85D, [Score=507, Expect=0.0]; FBgn0003888, betaTub60D, beta-Tubulin at 60D, [Score=507, Expect=0.0]; FBgn0003890, betaTub97EF, beta-Tubulin at 97EF, [Score=502, Expect=1e-179]} {Celegans: WBGene00000248, ben-1, Caenorhabditis elegans Protein BEN-1 (ben-1) mRNA, complete cds., [Score=510, Expect=0.0]} {Smed: dd_Smed_v6_83_0_3, [Score=513, Expect=0.0]} {Smes: dd_Smes_v1_88073_1_1, [Score=432, Expect=1e-152]} {Smans: Smp_079960.1, [Score=518, Expect=0.0]; Smp_192110.1, [Score=514, Expect=0.0]; Smp_079970.1, [Score=514, Expect=0.0]; Smp_078040.1, [Score=513, Expect=0.0]} {UniRef: UniRef50_P07437, Tubulin beta chain n=1408 Tax=Eukaryota TaxID=2759 RepID=TBB5_HUMAN, [Score=508, Expect=1e-179]; UniRef50_P61857, Tubulin beta-2 chain n=1573 Tax=Eukaryota TaxID=2759 RepID=TBB2_DROME, [Score=507, Expect=1e-179]; UniRef50_E2A684, Tubulin beta chain n=79 Tax=Eumetazoa TaxID=6072 RepID=E2A684_CAMFO, [Score=507, Expect=1e-178]; UniRef50_P68371, Tubulin beta-4B chain n=259 Tax=Eukaryota TaxID=2759 RepID=TBB4B_HUMAN, [Score=505, Expect=1e-178]; UniRef50_A0A147A9R5, Tubulin beta chain n=27 Tax=Bilateria TaxID=33213 RepID=A0A147A9R5_FUNHE, [Score=503, Expect=1e-177]; UniRef50_W5UK11, Tubulin beta chain n=12 Tax=Bilateria TaxID=33213 RepID=W5UK11_ICTPU, [Score=503, Expect=1e-177]} {RNA1509_44} |
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MligTCv3c-18081.1 | Mlig033002.g1 | 7.23 | Irradiation Int S/G2/M Germline |
Mlig033002.g1 {Length: 902} {SignalP} {RNA1509_1781, RNA1509_34070, RNA1509_4375, RNA1509_52804} | ||
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MligTCv3c-16250.2 | Mlig020807.g2, Mlig020807.g5 | 7.22 | Irradiation Int S/G2/M Germline |
Mlig020807.g2 {Length: 2309} {SignalP} {Pfam: Immunoglobulin domain [PF13927.4, score=48.5]; Immunoglobulin I-set domain [PF07679.14, score=43.4]; Immunoglobulin domain [PF13895.4, score=34.9]; Immunoglobulin V-set domain [PF07686.15, score=28.4]; Immunoglobulin domain [PF00047.23, score=26.0]} {RNA1509_42} Mlig020807.g5 {Length: 2313} {SignalP} {Pfam: Immunoglobulin domain [PF13927.4, score=48.5]; Immunoglobulin I-set domain [PF07679.14, score=43.4]; Immunoglobulin domain [PF13895.4, score=34.9]; Immunoglobulin V-set domain [PF07686.15, score=28.4]; Immunoglobulin domain [PF00047.23, score=26.0]} |
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MligTCv3c-17688.0 | Mlig002860.g3 | 7.03 | Irradiation Int S/G2/M Germline |
Mlig002860.g3 {Length: 1161} {SignalP} | ||
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MligTCv3c-6410.0 | Mlig011712.g5 | 6.97 | Irradiation Int S/G2/M Germline |
Testis; X1 | AC010614.2 | Mlig011712.g5 {Length: 2388} {Pfam: Scd6-like Sm domain [PF12701.5, score=93.5]; Ataxin 2 SM domain [PF14438.4, score=28.8]} {Human: ENSG00000257103, AC010614.2, protein LSM14 homolog A isoform b , [Score=118, Expect=6e-28]; ENSG00000105216, LSM14A, LSM14A, SCD6 homolog A (S. cerevisiae), [Score=118, Expect=6e-28]} {Dmel: FBgn0041775, tral, trailer hitch, [RH, Score=100, Expect=5e-22]} {Celegans: WBGene00012484, car-1, Caenorhabditis elegans Protein CAR-1 (car-1) mRNA, complete cds., [Score=107, Expect=3e-25]} {Smed: dd_Smed_v6_1125_0_1, [Score=112, Expect=2e-26]; dd_Smed_v6_49142_0_1, [Score=109, Expect=5e-27]} {Smes: dd_Smes_v1_54491_1_1, [Score=112, Expect=2e-26]; dd_Smes_v1_77813_1_1, [Score=110, Expect=1e-25]} {UniRef: UniRef50_UPI0006B7F40B, PREDICTED: protein LSM14 homolog A-like isoform X1 n=22 Tax=Euteleosteomorpha TaxID=1489388 RepID=UPI0006B7F40B, [Score=120, Expect=2e-26]; UniRef50_UPI00081198C4, UPI00081198C4 related cluster n=1 Tax=unknown TaxID= RepID=UPI00081198C4, [Score=120, Expect=2e-26]; UniRef50_UPI000674E955, PREDICTED: protein LSM14 homolog A-like isoform X1 n=7 Tax=Euthyneura TaxID=216307 RepID=UPI000674E955, [Score=119, Expect=6e-26]} {RNA1509_18892, RNA1509_244, RNA1509_55470, RNA1509_6395} |