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Found 816 results for log2(Irr72h/Irr24h) between 0 and -1 and fdr <= 0.05. Showing entries 1-20.
| Graph | Cluster | Transcripts | Mean logCPM | Classification | Smed/Human type | Human gene | Annotation |
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MligTCv3c-562.923 | Mlig999008.g1 | 14.44 | Mlig999008.g1 {Length: 867} {MITOS: rrnL, l-rRNA} {NoTransDecoderORF} {RNA1509_10, RNA1509_131, RNA1509_2, RNA1509_2023, RNA1509_309, RNA1509_311, RNA1509_37702, RNA1509_43660, RNA1509_46227, RNA1509_48581, RNA1509_565, RNA1509_892} | |||
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MligTCv3c-1729.7 | Mlig007116.g3 | 12.83 | Mlig007116.g3 {Length: 7259} {NoTransDecoderORF} {rRNA: 28s_rRNA,euk, score=3189.0} | |||
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MligTCv3c-1729.10 | Mlig007116.g29 | 12.29 | Mlig007116.g29 {Length: 5487} {NoTransDecoderORF} {rRNA: 18s_rRNA,euk, score=1506.2} {RNA1509_3} | |||
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MligTCv3c-1729.8 | Mlig007116.g18 | 12.11 | Mlig007116.g18 {Length: 4099} {NoTransDecoderORF} {RNA1509_3} | |||
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MligTCv3c-1729.13 | Mlig007116.g25 | 11.84 | Mlig007116.g25 {Length: 7074} {rRNA: 28s_rRNA,euk, score=2553.7} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.25, score=131.0]} {Smed: dd_Smed_v6_16441_0_5, [RH, Score=115, Expect=2e-27]} {Smes: dd_Smes_v1_38202_2_1, [RH, Score=146, Expect=4e-36]} {Smans: Smp_199470.1, [Score=92.4, Expect=2e-19]; Smp_191250.1, [Score=87.8, Expect=4e-18]} {UniRef: UniRef50_Q76IN8, Reverse transcriptase (Fragment) n=1 Tax=Ciona intestinalis TaxID=7719 RepID=Q76IN8_CIOIN, [Score=283, Expect=9e-82]} | |||
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MligTCv3c-11137.4 | Mlig015871.g2, Mlig015871.g3, Mlig011948.g5, Mlig011948.g4, Mlig011948.g3, Mlig011948.g1, Mlig011948.g2, Mlig011948.g10, Mlig059336.g1, Mlig010575.g1 | 10.78 | Mlig015871.g2 {Length: 367} {SignalP} {RNA1509_267} Mlig015871.g3 {Length: 371} {SignalP} {RNA1509_267} Mlig011948.g5 {Length: 371} {SignalP} {RNA1509_267} Mlig011948.g4 {Length: 371} {SignalP} {RNA1509_267} Mlig011948.g3 {Length: 359} {SignalP} {RNA1509_267} Mlig011948.g1 {Length: 370} {SignalP} {RNA1509_267} Mlig011948.g2 {Length: 371} {SignalP} {RNA1509_267} Mlig011948.g10 {Length: 371} {SignalP} Mlig059336.g1 {Length: 371} {SignalP} {RNA1509_267} Mlig010575.g1 {Length: 371} {SignalP} {RNA1509_22192, RNA1509_24, RNA1509_2520, RNA1509_267, RNA1509_57785} |
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MligTCv3c-1732.5 | Mlig999030.g1 | 9.84 | Mlig999030.g1 {Length: 739} {MITOS: rrnS, s-rRNA} {NoTransDecoderORF} {RNA1509_22262, RNA1509_5101} | |||
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MligTCv3c-562.8993 | Mlig018268.g1, Mlig029401.g1, Mlig018268.g2 | 9.58 | Irradiation |
Mlig018268.g1 {Length: 649} {SignalP} {Pfam: Carbohydrate binding [PF10645.7, score=36.6]} {RNA1509_829} Mlig029401.g1 {Length: 649} {SignalP} {Pfam: Carbohydrate binding [PF10645.7, score=36.6]} {RNA1509_829} Mlig018268.g2 {Length: 525} {SignalP} {Pfam: Carbohydrate binding [PF10645.7, score=36.6]} {RNA1509_30, RNA1509_379, RNA1509_457, RNA1509_829} |
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MligTCv3c-8933.0 | Mlig030334.g8, Mlig030334.g3, Mlig030334.g5 | 9.2 | Irradiation Int S/G2/M Germline |
Mlig030334.g8 {Length: 1665} {SignalP} {RNA1509_14264} Mlig030334.g3 {Length: 1665} {SignalP} {RNA1509_14264} Mlig030334.g5 {Length: 1662} {SignalP} {RNA1509_14264} |
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MligTCv3c-1729.22 | Mlig025773.g2, Mlig007116.g22, Mlig007116.g32 | 9.2 | Mlig025773.g2 {Length: 1415} {Smed: dd_Smed_v6_14495_0_1, [RH, Score=56.2, Expect=2e-09]} {Smes: dd_Smes_v1_38202_2_1, [Score=122, Expect=2e-30]} {Smans: Smp_188880.1, [RH, Score=116, Expect=3e-29]} {UniRef: UniRef50_Q76IP0, Reverse transcriptase n=1 Tax=Ciona intestinalis TaxID=7719 RepID=Q76IP0_CIOIN, [Score=178, Expect=2e-47]} {RNA1509_52941} Mlig007116.g22 {Length: 2478} {rRNA: 28s_rRNA,euk, score=271.0} {Smed: dd_Smed_v6_14495_0_1, [RH, Score=56.2, Expect=2e-09]} {Smes: dd_Smes_v1_38202_2_1, [Score=122, Expect=2e-30]} {Smans: Smp_188880.1, [RH, Score=116, Expect=3e-29]} {UniRef: UniRef50_Q76IP0, Reverse transcriptase n=1 Tax=Ciona intestinalis TaxID=7719 RepID=Q76IP0_CIOIN, [Score=178, Expect=2e-47]} {RNA1509_1780} Mlig007116.g32 {Length: 2476} {rRNA: 28s_rRNA,euk, score=284.7} {Smed: dd_Smed_v6_14495_0_1, [RH, Score=56.2, Expect=2e-09]} {Smes: dd_Smes_v1_38202_2_1, [Score=122, Expect=2e-30]} {Smans: Smp_188880.1, [RH, Score=116, Expect=3e-29]} {UniRef: UniRef50_Q76IP0, Reverse transcriptase n=1 Tax=Ciona intestinalis TaxID=7719 RepID=Q76IP0_CIOIN, [Score=178, Expect=2e-47]} {RNA1509_1780} |
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MligTCv3c-6023.1 | Mlig028529.g2, Mlig028529.g1 | 8.91 | Irradiation |
Mlig028529.g2 {Length: 825} {Pfam: EF-hand domain [PF13405.4, score=28.2]; EF hand [PF00036.30, score=26.4]; EF hand [PF13202.4, score=24.5]; EF-hand domain pair [PF13499.4, score=22.7]} {RNA1509_194, RNA1509_2542, RNA1509_298, RNA1509_3622, RNA1509_5624} Mlig028529.g1 {Length: 825} {Pfam: EF-hand domain [PF13405.4, score=28.2]; EF hand [PF00036.30, score=26.4]; EF hand [PF13202.4, score=24.5]; EF-hand domain pair [PF13499.4, score=22.7]} {RNA1509_298} |
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MligTCv3c-1729.18 | Mlig007116.g20 | 8.84 | Mlig007116.g20 {Length: 903} {NoTransDecoderORF} {RNA1509_35901} | |||
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MligTCv3c-11864.0 | Mlig014142.g1, Mlig034337.g1 | 8.64 | Xins | DYNLL2 | Mlig014142.g1 {Length: 637} {Pfam: Dynein light chain type 1 [PF01221.16, score=73.5]} {Human: ENSG00000121083, DYNLL2, dynein, light chain, LC8-type 2, [Score=50.8, Expect=4e-09]; ENSG00000088986, DYNLL1, dynein, light chain, LC8-type 1, [Score=50.1, Expect=9e-09]; ENSG00000205579, DYNLL1P1, dynein, light chain, LC8-type 1 pseudogene 1, [Score=48.9, Expect=2e-08]} {Dmel: FBgn0026141, Cdlc2, Cytoplasmic dynein light chain 2, [Score=48.9, Expect=1e-08]; FBgn0011760, ctp, cut up, [Score=48.9, Expect=1e-08]; FBgn0033687, CG8407, , [Score=47.8, Expect=4e-08]} {Celegans: WBGene00010888, dlc-2, Caenorhabditis elegans Protein DLC-2 (dlc-2) mRNA, complete cds., [Score=55.8, Expect=2e-11]} {Smed: dd_Smed_v6_11037_0_1, [Score=56.6, Expect=2e-11]; dd_Smed_v6_2487_0_1, [Score=55.8, Expect=2e-11]} {Smes: dd_Smes_v1_21202_1_1, [Score=57.0, Expect=9e-12]; dd_Smes_v1_12107_1_1, [Score=55.8, Expect=2e-11]} {Smans: Smp_040680.1, [Score=52.8, Expect=1e-10]; Smp_095520.1, [Score=52.4, Expect=2e-10]; Smp_200180.1, [Score=51.6, Expect=3e-10]} {UniRef: UniRef50_A0A0V0JBQ8, Dynein light chain 1 n=3 Tax=Eucestoda TaxID=6200 RepID=A0A0V0JBQ8_SCHSO, [Score=60.1, Expect=1e-10]; UniRef50_A0A068XES5, Dynein light chain n=9 Tax=Eucestoda TaxID=6200 RepID=A0A068XES5_HYMMI, [Score=59.7, Expect=2e-10]} {RNA1509_1026, RNA1509_1873, RNA1509_2888, RNA1509_51862} Mlig034337.g1 {Length: 637} {Pfam: Dynein light chain type 1 [PF01221.16, score=73.5]} {Human: ENSG00000121083, DYNLL2, dynein, light chain, LC8-type 2, [Score=50.8, Expect=4e-09]; ENSG00000088986, DYNLL1, dynein, light chain, LC8-type 1, [Score=50.1, Expect=9e-09]; ENSG00000205579, DYNLL1P1, dynein, light chain, LC8-type 1 pseudogene 1, [Score=48.9, Expect=2e-08]} {Dmel: FBgn0026141, Cdlc2, Cytoplasmic dynein light chain 2, [Score=48.9, Expect=1e-08]; FBgn0011760, ctp, cut up, [Score=48.9, Expect=1e-08]; FBgn0033687, CG8407, , [Score=47.8, Expect=4e-08]} {Celegans: WBGene00010888, dlc-2, Caenorhabditis elegans Protein DLC-2 (dlc-2) mRNA, complete cds., [Score=55.8, Expect=2e-11]} {Smed: dd_Smed_v6_11037_0_1, [Score=56.6, Expect=2e-11]; dd_Smed_v6_2487_0_1, [Score=55.8, Expect=2e-11]} {Smes: dd_Smes_v1_21202_1_1, [Score=57.0, Expect=9e-12]; dd_Smes_v1_12107_1_1, [Score=55.8, Expect=2e-11]} {Smans: Smp_040680.1, [Score=52.8, Expect=1e-10]; Smp_095520.1, [Score=52.4, Expect=2e-10]; Smp_200180.1, [Score=51.6, Expect=3e-10]} {UniRef: UniRef50_A0A0V0JBQ8, Dynein light chain 1 n=3 Tax=Eucestoda TaxID=6200 RepID=A0A0V0JBQ8_SCHSO, [Score=60.1, Expect=1e-10]; UniRef50_A0A068XES5, Dynein light chain n=9 Tax=Eucestoda TaxID=6200 RepID=A0A068XES5_HYMMI, [Score=59.7, Expect=2e-10]} {RNA1509_1026} |
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MligTCv3c-12361.1 | Mlig004052.g1 | 8.61 | Int S/G2/M |
X1 | RPS16 | Mlig004052.g1 {Length: 644} {TRANSSPLICED} {Pfam: Ribosomal protein S9/S16 [PF00380.17, score=109.8]} {Human: ENSG00000105193, RPS16, ribosomal protein S16, [RH, Score=242, Expect=2e-83]} {Dmel: FBgn0034743, RpS16, Ribosomal protein S16, [RH, Score=239, Expect=2e-82]} {Celegans: WBGene00004485, rps-16, Caenorhabditis elegans Protein RPS-16 (rps-16) mRNA, complete cds., [RH, Score=216, Expect=2e-73]} {Smed: dd_Smed_v6_170_0_1, [RH, Score=213, Expect=2e-72]} {Smes: dd_Smes_v1_22538_1_1, [RH, Score=213, Expect=2e-72]} {Smans: Smp_119920.1, [RH, Score=207, Expect=4e-70]} {UniRef: UniRef50_A0A0V1ME00, 40S ribosomal protein S16 n=26 Tax=Eukaryota TaxID=2759 RepID=A0A0V1ME00_9BILA, [Score=246, Expect=6e-83]; UniRef50_A0A151PFQ7, 40S ribosomal protein S16 n=49 Tax=Eukaryota TaxID=2759 RepID=A0A151PFQ7_ALLMI, [Score=245, Expect=3e-82]} |
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MligTCv3c-1729.15 | Mlig026799.g2 | 8.44 | Mlig026799.g2 {Length: 2388} {NoTransDecoderORF} {rRNA: 28s_rRNA,euk, score=1422.3} {RNA1509_1} | |||
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MligTCv3c-12673.2 | Mlig021770.g2 | 8.2 | Irradiation |
Mlig021770.g2 {Length: 713} {SignalP} {Pfam: PAN domain [PF14295.4, score=25.3]} {UniRef: UniRef50_UPI0002B47738, PREDICTED: uncharacterized protein LOC101238014 n=1 Tax=Hydra vulgaris TaxID=6087 RepID=UPI0002B47738, [Score=116, Expect=1e-30]} {RNA1509_11555, RNA1509_1513, RNA1509_272, RNA1509_4342, RNA1509_5952} | ||
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MligTCv3c-8538.7 | Mlig024642.g4 | 8.14 | Irradiation |
Mlig024642.g4 {Length: 475} {TRANSSPLICED} {RNA1509_651} | ||
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MligTCv3c-11617.0 | Mlig002346.g1, Mlig001037.g1, Mlig001037.g3 | 8.08 | Int S/G2/M S/G2/M, no gonads Neoblast |
X1 | RPL38 | Mlig002346.g1 {Length: 381} {TRANSSPLICED} {Pfam: Ribosomal L38e protein family [PF01781.16, score=122.1]} {Human: ENSG00000172809, RPL38, ribosomal protein L38, [RH, Score=124, Expect=4e-39]} {Dmel: FBgn0040007, RpL38, Ribosomal protein L38, [RH, Score=110, Expect=9e-34]} {Celegans: WBGene00004452, rpl-38, Caenorhabditis elegans Protein RPL-38 (rpl-38) mRNA, complete cds., [RH, Score=113, Expect=4e-35]} {Smed: dd_Smed_v6_236_0_1, [RH, Score=117, Expect=7e-37]} {Smes: dd_Smes_v1_66708_1_1, [RH, Score=117, Expect=8e-37]} {Smans: Smp_058720.1, [RH, Score=86.3, Expect=1e-24]} {UniRef: UniRef50_UPI00045D86D6, PREDICTED: 60S ribosomal protein L38 isoform X3 n=2 Tax=Primates TaxID=9443 RepID=UPI00045D86D6, [Score=126, Expect=6e-36]; UniRef50_UPI00092EC5B7, UPI00092EC5B7 related cluster n=4 Tax=unknown TaxID= RepID=UPI00092EC5B7, [Score=125, Expect=4e-37]; UniRef50_C0H7L4, 60S ribosomal protein L38 n=1 Tax=Salmo salar TaxID=8030 RepID=C0H7L4_SALSA, [Score=125, Expect=1e-35]} Mlig001037.g1 {Length: 371} {TRANSSPLICED} {Pfam: Ribosomal L38e protein family [PF01781.16, score=122.1]} {Human: ENSG00000172809, RPL38, ribosomal protein L38, [RH, Score=124, Expect=4e-39]} {Dmel: FBgn0040007, RpL38, Ribosomal protein L38, [RH, Score=110, Expect=9e-34]} {Celegans: WBGene00004452, rpl-38, Caenorhabditis elegans Protein RPL-38 (rpl-38) mRNA, complete cds., [RH, Score=113, Expect=4e-35]} {Smed: dd_Smed_v6_236_0_1, [RH, Score=117, Expect=7e-37]} {Smes: dd_Smes_v1_66708_1_1, [RH, Score=117, Expect=8e-37]} {Smans: Smp_058720.1, [RH, Score=86.3, Expect=1e-24]} {UniRef: UniRef50_UPI00045D86D6, PREDICTED: 60S ribosomal protein L38 isoform X3 n=2 Tax=Primates TaxID=9443 RepID=UPI00045D86D6, [Score=126, Expect=6e-36]; UniRef50_UPI00092EC5B7, UPI00092EC5B7 related cluster n=4 Tax=unknown TaxID= RepID=UPI00092EC5B7, [Score=125, Expect=4e-37]; UniRef50_C0H7L4, 60S ribosomal protein L38 n=1 Tax=Salmo salar TaxID=8030 RepID=C0H7L4_SALSA, [Score=125, Expect=1e-35]} Mlig001037.g3 {Length: 376} {TRANSSPLICED} {Pfam: Ribosomal L38e protein family [PF01781.16, score=122.1]} {Human: ENSG00000172809, RPL38, ribosomal protein L38, [RH, Score=124, Expect=4e-39]} {Dmel: FBgn0040007, RpL38, Ribosomal protein L38, [RH, Score=110, Expect=9e-34]} {Celegans: WBGene00004452, rpl-38, Caenorhabditis elegans Protein RPL-38 (rpl-38) mRNA, complete cds., [RH, Score=113, Expect=4e-35]} {Smed: dd_Smed_v6_236_0_1, [RH, Score=117, Expect=7e-37]} {Smes: dd_Smes_v1_66708_1_1, [RH, Score=117, Expect=8e-37]} {Smans: Smp_058720.1, [RH, Score=86.3, Expect=1e-24]} {UniRef: UniRef50_UPI00045D86D6, PREDICTED: 60S ribosomal protein L38 isoform X3 n=2 Tax=Primates TaxID=9443 RepID=UPI00045D86D6, [Score=126, Expect=6e-36]; UniRef50_UPI00092EC5B7, UPI00092EC5B7 related cluster n=4 Tax=unknown TaxID= RepID=UPI00092EC5B7, [Score=125, Expect=4e-37]; UniRef50_C0H7L4, 60S ribosomal protein L38 n=1 Tax=Salmo salar TaxID=8030 RepID=C0H7L4_SALSA, [Score=125, Expect=1e-35]} |
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MligTCv3c-8612.3 | Mlig032315.g2, Mlig032315.g4 | 7.81 | Int S/G2/M S/G2/M, no gonads Neoblast |
Mlig032315.g2 {Length: 294} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_48305} Mlig032315.g4 {Length: 294} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_46177, RNA1509_48305} |
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MligTCv3c-19410.0 | Mlig021163.g1, Mlig021163.g4, Mlig021163.g5 | 7.71 | Irradiation Int S/G2/M S/G2/M, no gonads Neoblast Neoblast, stringent |
Mlig021163.g1 {Length: 1686} {TRANSSPLICED} {RNA1509_490} Mlig021163.g4 {Length: 1686} {TRANSSPLICED} {RNA1509_37608, RNA1509_490} Mlig021163.g5 {Length: 1686} {TRANSSPLICED} {RNA1509_490, RNA1509_50533} |